The outer large ventral fins could probably have been done away with in a production version. They are only there for stability like the big center-hinged ventral on the YF-12A, which, as it was discovered later, was unnecessary. Stability augmentation systems could handle the relaxed stability which would also reduce weight, drag, and improve maneuverability.
I have the Anigrand 1/72 XF-108 and if its correct (which I believe it is) the outer wingtip does not have any dihedral, it is indeed a different twist for that portion of the wing in combination with the reduced sweep which makes it look like it has a dihedral.
Another observation. 3 AIM-47's is paltry for such a large aircraft. However, the electronics bay takes up a lot of space and weight. With modern electronics the F-108 could easily carry 6 AIM-47 size missiles plus at least 2 ASRAAM's for close-in defense.